Coerce a KRT's resources to a DataFrame (Bioconductor)
Arguments
- x
A krt_tbl.
- view
The view to project (default
"wide").
Value
An S4Vectors::DataFrame of the resources (requires the S4Vectors
package).
Examples
if (requireNamespace("S4Vectors", quietly = TRUE)) krt_as_dataframe(krt_example)
#> DataFrame with 6 rows and 23 columns
#> resource_id resource_type display_name
#> <character> <character> <character>
#> 1 res-98afe7fc2d Antibody Rabbit Anti-TH
#> 2 res-8d057f14a1 Experimental model: .. HEK293T
#> 3 res-51c17ebad6 Software/code Fiji
#> 4 res-17e9da800e Dataset Processed RNA-seq co..
#> 5 res-31f7bacd67 Experimental model: .. C57BL/6J mice
#> 6 res-fc42d10d25 Protocol Immunohistochemistry..
#> source_name vendor catalog_number rrid
#> <character> <character> <character> <character>
#> 1 Millipore Millipore AB152 RRID:AB_390204
#> 2 ATCC ATCC CRL-3216 RRID:CVCL_0063
#> 3 NIH NA NA RRID:SCR_002285
#> 4 Zenodo NA NA NA
#> 5 The Jackson Laboratory NA NA RRID:IMSR_JAX:000664
#> 6 protocols.io NA NA NA
#> doi url version new_or_reuse
#> <character> <character> <character> <character>
#> 1 NA NA NA reuse
#> 2 NA NA NA reuse
#> 3 NA https://imagej.net/s.. 2.14.0 reuse
#> 4 10.5281/zenodo.11111.. NA NA new
#> 5 NA NA NA reuse
#> 6 10.17504/protocols.i.. NA NA new
#> organism taxon_id strain cellosaurus_id authentication_method
#> <character> <character> <character> <character> <character>
#> 1 NA NA NA NA NA
#> 2 Homo sapiens 9606 NA CVCL_0063 STR
#> 3 NA NA NA NA NA
#> 4 NA NA NA NA NA
#> 5 Mus musculus 10090 C57BL/6J NA NA
#> 6 NA NA NA NA NA
#> authentication_date mycoplasma_status antibody_host antibody_clonality
#> <character> <character> <character> <character>
#> 1 NA NA Rabbit polyclonal
#> 2 2026-01-20 negative NA NA
#> 3 NA NA NA NA
#> 4 NA NA NA NA
#> 5 NA NA NA NA
#> 6 NA NA NA NA
#> target language notes
#> <character> <character> <character>
#> 1 Tyrosine hydroxylase NA Dilution 1:500
#> 2 NA NA NA
#> 3 NA Java NA
#> 4 NA NA Tabular data underly..
#> 5 NA NA NA
#> 6 NA NA NA